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Johnson RE

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Publications:

Title Authors Year Journal
An iron-sulfur cluster in the polymerase domain of yeast DNA polymerase ε Johnson RE 2013 Journal of molecular biology
The Architecture of Yeast DNA Polymerase ζ Johnson RE 2013 Cell reports
Structural basis for cisplatin DNA damage tolerance by human polymerase η during cancer chemotherapy. Johnson RE 2012 Nature structural & molecular biology
Pol31 and Pol32 subunits of yeast DNA polymerase δ are also essential subunits of DNA polymerase ζ Johnson RE 2012 Proceedings of the National Academy of Sciences of the United States of America
A novel ubiquitin binding mode in the S. cerevisiae translesion synthesis DNA polymerase η. Johnson RE 2011 Molecular bioSystems
Human DNA Polymerase η Is Pre-Aligned for dNTP Binding and Catalysis. Johnson RE 2011 Journal of molecular biology
Role of human DNA polymerase κ in extension opposite from a cis-syn thymine dimer. Johnson RE 2011 Journal of molecular biology
PCNA binding domains in all three subunits of yeast DNA polymerase {delta} modulate its function in DNA replication. Johnson RE 2011 Proceedings of the National Academy of Sciences of the United States of America
DNA synthesis across an abasic lesion by yeast REV1 DNA polymerase. Johnson RE 2011 Journal of molecular biology
Structural basis for the suppression of skin cancers by DNA polymerase eta. Johnson RE 2010 Nature
Pre-steady state kinetic studies of the fidelity of nucleotide incorporation by yeast DNA polymerase delta. Johnson RE 2010 Biochemistry
Structural basis for error-free replication of oxidatively damaged DNA by yeast DNA polymerase eta. Johnson RE 2010 Structure (London, England : 1993)
Replication across template T/U by human DNA polymerase-iota. Johnson RE 2009 Structure (London, England : 1993)
Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase delta. Johnson RE 2009 Nature structural & molecular biology
Structure of human DNA polymerase kappa inserting dATP opposite an 8-OxoG DNA lesion. Johnson RE 2009 PloS one
Yeast Rev1 protein promotes complex formation of DNA polymerase zeta with Pol32 subunit of DNA polymerase delta. Johnson RE 2009 Proceedings of the National Academy of Sciences of the United States of America
Structural insights into yeast DNA polymerase delta by small angle X-ray scattering. Johnson RE 2009 Journal of molecular biology
DNA synthesis across an abasic lesion by human DNA polymerase iota. Johnson RE 2009 Structure (London, England : 1993)
Protein-template-directed synthesis across an acrolein-derived DNA adduct by yeast Rev1 DNA polymerase. Johnson RE 2008 Structure (London, England : 1993)
Roles of PCNA-binding and ubiquitin-binding domains in human DNA polymerase eta in translesion DNA synthesis. Johnson RE 2008 Proceedings of the National Academy of Sciences of the United States of America
Regulation of polymerase exchange between Poleta and Poldelta by monoubiquitination of PCNA and the movement of DNA polymerase holoenzyme. Johnson RE 2008 Proceedings of the National Academy of Sciences of the United States of America
Human DNA polymerase kappa encircles DNA: implications for mismatch extension and lesion bypass. Johnson RE 2007 Molecular cell
Human DNA polymerase kappa forms nonproductive complexes with matched primer termini but not with mismatched primer termini. Johnson RE 2006 Proceedings of the National Academy of Sciences of the United States of America
Complex formation with Rev1 enhances the proficiency of Saccharomyces cerevisiae DNA polymerase zeta for mismatch extension and for extension opposite from DNA lesions. Johnson RE 2006 Molecular and cellular biology
Yeast and human translesion DNA synthesis polymerases: expression, purification, and biochemical characterization. Johnson RE 2006 Methods in enzymology
Replication past a trans-4-hydroxynonenal minor-groove adduct by the sequential action of human DNA polymerases iota and kappa. Johnson RE 2006 Molecular and cellular biology
Role of hoogsteen edge hydrogen bonding at template purines in nucleotide incorporation by human DNA polymerase iota. Johnson RE 2006 Molecular and cellular biology
Hoogsteen base pair formation promotes synthesis opposite the 1,N6-ethenodeoxyadenosine lesion by human DNA polymerase iota. Johnson RE 2006 Nature structural & molecular biology
An incoming nucleotide imposes an anti to syn conformational change on the templating purine in the human DNA polymerase-iota active site. Johnson RE 2006 Structure (London, England : 1993)
Human DNA polymerase iota promotes replication through a ring-closed minor-groove adduct that adopts a syn conformation in DNA. Johnson RE 2005 Molecular and cellular biology
Eukaryotic translesion synthesis DNA polymerases: specificity of structure and function. Johnson RE 2005 Annu Rev Biochem
A single domain in human DNA polymerase iota mediates interaction with PCNA: implications for translesion DNA synthesis. Johnson RE 2005 Molecular and cellular biology
Trf4 and Trf5 proteins of Saccharomyces cerevisiae exhibit poly(A) RNA polymerase activity but no DNA polymerase activity. Johnson RE 2005 Molecular and cellular biology
Biochemical evidence for the requirement of Hoogsteen base pairing for replication by human DNA polymerase iota. Johnson RE 2005 Proceedings of the National Academy of Sciences of the United States of America
Human DNA polymerase iota incorporates dCTP opposite template G via a G.C + Hoogsteen base pair. Johnson RE 2005 Structure (London, England : 1993)
Distinct mechanisms of cis-syn thymine dimer bypass by Dpo4 and DNA polymerase eta. Johnson RE 2005 Proceedings of the National Academy of Sciences of the United States of America
Complex formation of yeast Rev1 and Rev7 proteins: a novel role for the polymerase-associated domain. Johnson RE 2005 Molecular and cellular biology
Rev1 employs a novel mechanism of DNA synthesis using a protein template. Johnson RE 2005 Science (New York, N.Y.)
Crystal structure of the catalytic core of human DNA polymerase kappa. Johnson RE 2004 Structure (London, England : 1993)
Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing. Johnson RE 2004 Nature
Dpo4 is hindered in extending a G.T mismatch by a reverse wobble. Johnson RE 2004 Nature structural & molecular biology
Human DNA polymerase iota utilizes different nucleotide incorporation mechanisms dependent upon the template base. Johnson RE 2004 Molecular and cellular biology
Efficient and error-free replication past a minor-groove N2-guanine adduct by the sequential action of yeast Rev1 and DNA polymerase zeta. Johnson RE 2004 Molecular and cellular biology
Efficient and error-free replication past a minor-groove DNA adduct by the sequential action of human DNA polymerases iota and kappa. Johnson RE 2004 Molecular and cellular biology
The mechanism of nucleotide incorporation by human DNA polymerase eta differs from that of the yeast enzyme. Johnson RE 2003 Molecular and cellular biology
Deoxynucleotide triphosphate binding mode conserved in Y family DNA polymerases. Johnson RE 2003 Molecular and cellular biology
Yeast DNA polymerase zeta (zeta) is essential for error-free replication past thymine glycol. Johnson RE 2003 Genes & development
Stimulation of DNA synthesis activity of human DNA polymerase kappa by PCNA. Johnson RE 2002 Molecular and cellular biology
Human DINB1-encoded DNA polymerase kappa is a promiscuous extender of mispaired primer termini. Johnson RE 2002 Proceedings of the National Academy of Sciences of the United States of America
Targeting of human DNA polymerase iota to the replication machinery via interaction with PCNA. Johnson RE 2001 Proceedings of the National Academy of Sciences of the United States of America
Physical and functional interactions of human DNA polymerase eta with PCNA. Johnson RE 2001 Molecular and cellular biology
Requirement of DNA polymerase eta for error-free bypass of UV-induced CC and TC photoproducts. Johnson RE 2001 Molecular and cellular biology
Role of DNA polymerase zeta in the bypass of a (6-4) TT photoproduct. Johnson RE 2001 Molecular and cellular biology
Structure of the catalytic core of S. cerevisiae DNA polymerase eta: implications for translesion DNA synthesis. Johnson RE 2001 Molecular cell
Accuracy of lesion bypass by yeast and human DNA polymerase eta. Johnson RE 2001 Proceedings of the National Academy of Sciences of the United States of America
Mismatch extension ability of yeast and human DNA polymerase eta. Johnson RE 2001 The Journal of biological chemistry
Fidelity and damage bypass ability of Schizosaccharomyces pombe Eso1 protein, comprised of DNA polymerase eta and sister chromatid cohesion protein Ctf7. Johnson RE 2001 The Journal of biological chemistry
Roles of yeast DNA polymerases delta and zeta and of Rev1 in the bypass of abasic sites. Johnson RE 2001 Genes Dev
Role of yeast and human DNA polymerase eta in error-free replication of damaged DNA. Johnson RE 2000 Cold Spring Harbor symposia on quantitative biology
Accuracy of thymine-thymine dimer bypass by Saccharomyces cerevisiae DNA polymerase eta. Johnson RE 2000 Proceedings of the National Academy of Sciences of the United States of America
The human DINB1 gene encodes the DNA polymerase Poltheta. Johnson RE 2000 Proceedings of the National Academy of Sciences of the United States of America
Fidelity of human DNA polymerase eta. Johnson RE 2000 The Journal of biological chemistry
Eukaryotic polymerases iota and zeta act sequentially to bypass DNA lesions. Johnson RE 2000 Nature
Efficient and accurate replication in the presence of 7,8-dihydro-8-oxoguanine by DNA polymerase eta. Johnson RE 2000 Nat Genet
Efficient bypass of a thymine-thymine dimer by yeast DNA polymerase, Poleta. Johnson RE 1999 Science
Bridging the gap: a family of novel DNA polymerases that replicate faulty DNA. Johnson RE 1999 Proceedings of the National Academy of Sciences of the United States of America
hRAD30 mutations in the variant form of xeroderma pigmentosum. Johnson RE 1999 Science (New York, N.Y.)
Requirement of DNA polymerase activity of yeast Rad30 protein for its biological function. Johnson RE 1999 The Journal of biological chemistry
Fidelity and processivity of Saccharomyces cerevisiae DNA polymerase eta. Johnson RE 1999 The Journal of biological chemistry
Identification of APN2, the Saccharomyces cerevisiae homolog of the major human AP endonuclease HAP1, and its role in the repair of abasic sites. Johnson RE 1998 Genes & development

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